STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_08065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (681 aa)    
Predicted Functional Partners:
BU52_31445
DNA repair ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.917
BU52_01490
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.613
BU52_24785
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.613
BU52_07720
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.594
BU52_09770
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.594
BU52_29170
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
BU52_08060
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
BU52_21585
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
BU52_21375
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.462
BU52_25140
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.