STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_08085TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
BU52_08080
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
BU52_09360
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
BU52_19220
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.751
BU52_25660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
BU52_09355
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
BU52_09365
ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
BU52_08095
Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
BU52_14120
NsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
BU52_25625
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
BU52_05580
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.692
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.