STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_08225TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
BU52_08255
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
BU52_08240
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
BU52_08260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.896
BU52_08230
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_08235
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_08250
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
BU52_08265
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
BU52_08245
acetyl-CoA carboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.570
BU52_28645
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.535
BU52_02570
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.