STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_09230Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
BU52_07015
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
BU52_08200
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
BU52_16355
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.941
BU52_09250
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.914
BU52_03335
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.898
BU52_08815
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.836
BU52_20285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.834
BU52_13750
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.821
BU52_05665
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.799
BU52_19915
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.797
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.