STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_09525Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (172 aa)    
Predicted Functional Partners:
BU52_09530
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.981
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.921
BU52_10320
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.889
BU52_00895
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.793
BU52_05280
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.793
BU52_09520
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
BU52_02485
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.707
BU52_15165
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.672
BU52_07015
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.666
BU52_16355
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.664
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.