STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_11060Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)    
Predicted Functional Partners:
BU52_19780
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.786
BU52_18875
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.762
BU52_14395
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.719
BU52_28110
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.696
BU52_21240
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.527
BU52_04720
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
BU52_22425
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.499
BU52_01180
Streptomycin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
BU52_02100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.478
BU52_07890
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.475
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.