STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_11330Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
BU52_11335
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
BU52_11340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
BU52_07820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.678
BU52_11355
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
       0.580
BU52_22955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BU52_20085
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
BU52_19135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.509
whiB-4
WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.502
BU52_11400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.451
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.