STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_11380beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)    
Predicted Functional Partners:
BU52_21745
PTS alpha-glucoside transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.955
BU52_13335
beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.844
BU52_21515
PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.844
BU52_21240
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.843
BU52_19780
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.842
BU52_28110
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.826
BU52_11385
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
BU52_07915
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.783
BU52_11395
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.773
BU52_18875
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.754
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.