STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_12610Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
BU52_12605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.972
BU52_12600
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.833
thrS
threonine--tRNA ligase; Catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.793
BU52_08155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
BU52_30165
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
BU52_24840
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
BU52_20355
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
BU52_23650
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
BU52_20285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
BU52_07295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.