BU52_13375 protein (Streptomyces toyocaensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

BU52_13375

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)

Predicted Functional Partners:

BU52_13380

0.877

pheT

0.562

BU52_13385

0.556

BU52_02760

0.542

BU52_11960

0.482

Your Current Organism:

Streptomyces toyocaensis

NCBI taxonomy Id: 55952
Other names: S. toyocaensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BU52_02760	BU52_13375	BU52_02760	BU52_13375	Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
BU52_11960	BU52_13375	BU52_11960	BU52_13375	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
BU52_13375	BU52_02760	BU52_13375	BU52_02760	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
BU52_13375	BU52_11960	BU52_13375	BU52_11960	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
BU52_13375	BU52_13380	BU52_13375	BU52_13380	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
BU52_13375	BU52_13385	BU52_13375	BU52_13385	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
BU52_13375	pheT	BU52_13375	BU52_12280	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.562
BU52_13380	BU52_13375	BU52_13380	BU52_13375	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
BU52_13380	BU52_13385	BU52_13380	BU52_13385	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
BU52_13385	BU52_13375	BU52_13385	BU52_13375	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
BU52_13385	BU52_13380	BU52_13385	BU52_13380	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
pheT	BU52_13375	BU52_12280	BU52_13375	phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562