STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15125Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)    
Predicted Functional Partners:
BU52_15135
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
BU52_15140
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
BU52_15130
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_15145
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.797
BU52_15120
Inhibition of morphological differentiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.711
BU52_00985
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.690
BU52_01180
Streptomycin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.690
BU52_20750
Plasmid partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
 
 0.690
BU52_28960
Plasmid partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
 
 0.690
BU52_19775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.