STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15155Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)    
Predicted Functional Partners:
BU52_15145
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.898
BU52_15150
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.897
BU52_15140
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.858
BU52_15135
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.836
BU52_15130
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.812
BU52_12290
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
BU52_15125
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
BU52_17335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
BU52_18930
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
BU52_08905
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.