STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15580Protein spdB; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
BU52_15575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_15585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_15590
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_15595
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
BU52_30725
Integral membrane plasmid transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BU52_15570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.541
BU52_15600
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.