STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15650Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
BU52_15645
Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
BU52_15655
Cobalt ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 0.999
BU52_31435
Cobalt ABC transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 0.998
cbiM
Cobalt transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.995
BU52_18020
Biotin biosynthesis protein BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.979
cbiN
Hypothetical protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.972
BU52_23570
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.970
BU52_31430
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.957
BU52_22345
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.943
BU52_23575
Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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