STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15695Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family. (1088 aa)    
Predicted Functional Partners:
BU52_11515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.893
BU52_20025
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  0.759
BU52_25140
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.698
BU52_11880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.684
BU52_06330
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.682
pheT
phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.676
BU52_00210
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the protease inhibitor I16 (SSI) family.
   
  0.640
BU52_01080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.640
BU52_02475
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.640
sti
Hypothetical protein; Strong inhibitor of bacterial serine proteases such as subtilisin.
   
  0.640
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.