STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15820Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
BU52_28125
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.903
BU52_28150
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.884
mscL
Mechanosensitive ion channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.773
BU52_15815
Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
       0.736
BU52_06050
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.724
BU52_06055
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.722
BU52_15135
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.713
BU52_15810
FmdB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.704
BU52_06065
Pilus assembly protein TadG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.693
BU52_06070
Septum determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.681
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.