STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_15960Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
BU52_27955
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.739
BU52_16220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.682
BU52_28555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
  0.519
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.519
BU52_15970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.473
BU52_15965
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.444
BU52_25855
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.428
BU52_15975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
BU52_14145
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.412
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.