Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BU52_16005Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
BU52_07015
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.973
BU52_16010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.942
BU52_24815
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.846
BU52_02370
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.831
BU52_31135
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.828
BU52_28155
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.826
BU52_08200
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.818
BU52_18960
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.813
BU52_14790
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.808
BU52_09760
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.805
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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