STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_16965alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)    
Predicted Functional Partners:
BU52_01495
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.777
BU52_16970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.770
BU52_03610
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.763
BU52_25225
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.729
BU52_03520
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.700
BU52_04835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 31 family.
 
     0.697
BU52_30200
5-amino-6-(5-phosphoribosylamino)uracil reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.654
BU52_01955
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.646
BU52_27970
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.646
BU52_07870
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.641
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.