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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_17045Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
BU52_17050
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
BU52_10980
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.653
BU52_17945
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
BU52_18525
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.624
BU52_00555
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
BU52_28300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
BU52_24350
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
BU52_05460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
BU52_17055
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
BU52_05510
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.543
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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