STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_17095Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)    
Predicted Functional Partners:
BU52_17090
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.758
BU52_21515
PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.722
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.656
BU52_11485
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.580
BU52_26310
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
BU52_01915
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
BU52_21190
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
BU52_08940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
BU52_25930
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
BU52_17085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.476
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.