STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_17410ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
BU52_17415
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
BU52_17405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.819
BU52_06280
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.801
BU52_18430
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.760
BU52_20420
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.760
BU52_20430
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.722
BU52_19865
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.683
BU52_19875
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.681
BU52_09380
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.675
BU52_26675
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.667
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.