STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_17715Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
BU52_17700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.696
BU52_17710
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.669
BU52_24185
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.549
BU52_02915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
BU52_17705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
BU52_14020
Phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.459
BU52_20395
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
BU52_04100
Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
BU52_23160
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
BU52_27170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.