STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_17900Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
BU52_17905
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.999
BU52_17895
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
BU52_17890
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
 
  
 0.959
BU52_17910
Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.927
BU52_17920
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.791
BU52_07030
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.780
BU52_29470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
BU52_17885
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
BU52_14095
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
BU52_05435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.