STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_18160Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
BU52_18165
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.764
BU52_18155
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
BU52_18170
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
BU52_18175
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.671
BU52_18180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.667
BU52_18185
Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
  
    0.655
BU52_23815
Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.651
BU52_18190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.643
BU52_18205
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.609
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.