STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_18355Chaplin; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)    
Predicted Functional Partners:
BU52_08575
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.818
BU52_21710
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  0.818
BU52_23335
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  0.818
BU52_26885
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  0.818
BU52_12900
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.723
BU52_02025
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.680
BU52_02480
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.680
BU52_15695
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
   
  0.640
BU52_19065
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
   
  0.640
BU52_11495
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
  0.627
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.