STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_18580Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
BU52_18585
DDE endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.929
BU52_32170
DDE endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.810
BU52_04885
Lantibiotic dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
BU52_04905
Lantibiotic dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
BU52_18725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
BU52_14120
NsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
BU52_22060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
BU52_19835
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
BU52_30170
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
BU52_28770
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.442
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.