STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_18680ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)    
Predicted Functional Partners:
BU52_18675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.875
BU52_18685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.845
BU52_18670
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
BU52_27320
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.625
BU52_18665
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.623
BU52_06965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
BU52_18660
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.598
BU52_07975
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.575
BU52_25075
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.573
BU52_18690
Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.