STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19115Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (153 aa)    
Predicted Functional Partners:
BU52_10330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.877
BU52_20390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.859
BU52_18665
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.695
BU52_10340
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.676
BU52_20110
Transport integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
BU52_20395
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
BU52_16255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
BU52_03460
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.578
BU52_26305
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.578
BU52_32305
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.566
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.