STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19160Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
BU52_19155
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
BU52_19165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
BU52_06090
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase A24 family.
   
  
 0.807
BU52_19170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.725
BU52_09145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.685
BU52_18000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.685
leuS
leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.672
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
  0.655
BU52_32915
Competence protein CoiA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.631
BU52_19150
MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.619
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.