STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19365ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)    
Predicted Functional Partners:
BU52_07015
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.999
BU52_19370
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.987
BU52_16355
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.912
BU52_03075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.896
BU52_19655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.890
BU52_00100
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.887
BU52_30130
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.880
BU52_07160
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.879
BU52_13120
Transcriptional regulatory protein AfsQ1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.879
BU52_00980
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.875
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.