STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19465Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
BU52_01985
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.963
BU52_10205
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.963
BU52_27020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.945
BU52_31945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.945
BU52_01600
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.938
BU52_25035
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.936
BU52_26770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.936
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.913
BU52_18535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
BU52_16340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.899
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.