STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19530Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
BU52_19525
5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.903
BU52_19535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.596
BU52_23010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.584
BU52_23000
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
BU52_14290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.549
BU52_22085
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.512
BU52_04745
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
BU52_28550
Chloramphenicol phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
BU52_19555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.421
BU52_32885
Chloramphenicol phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.