Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19780Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)    
Predicted Functional Partners:
BU52_28110
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
0.924
BU52_19790
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.923
BU52_13335
beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.911
BU52_14395
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.901
BU52_18875
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.900
BU52_02100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.899
BU52_21240
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.891
BU52_07890
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.890
BU52_27550
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.873
BU52_07915
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.862
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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