STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19845Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
BU52_02275
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
BU52_15110
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
nucS
Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
       0.742
BU52_19850
Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
BU52_26395
AbaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
BU52_15250
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
BU52_04630
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
BU52_12950
RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
BU52_11575
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.408
BU52_23600
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.