STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_19960Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
BU52_09705
Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.748
BU52_09685
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
BU52_19950
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.710
BU52_17240
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.707
BU52_05815
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
BU52_19920
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.685
BU52_19940
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
BU52_19945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
BU52_08655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
BU52_14760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.