STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_21805Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)    
Predicted Functional Partners:
BU52_23640
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.966
BU52_23635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.924
BU52_21800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.921
BU52_21790
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.892
BU52_21810
Pyrroloquinoline quinone biosynthesis protein PqqE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.861
BU52_18850
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.821
BU52_11450
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.809
BU52_18845
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.808
BU52_21765
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.803
narY
Nitrate reductase; With NarZV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.792
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.