STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_21820Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
BU52_21815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.909
BU52_21805
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.753
BU52_23635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
BU52_23640
Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.722
BU52_23630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.705
BU52_24035
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.547
BU52_21810
Pyrroloquinoline quinone biosynthesis protein PqqE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.470
BU52_21800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.431
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.