STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_22325Polyketide biosynthesis methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
BU52_22320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
BU52_22350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.696
BU52_22310
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
BU52_22305
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
BU52_22300
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
BU52_22330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.613
BU52_26055
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
BU52_22340
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.562
BU52_22315
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.536
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.507
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.