STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menCO-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (371 aa)    
Predicted Functional Partners:
BU52_22955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.972
BU52_22960
Glutamate carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.942
BU52_14435
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.899
BU52_22965
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.857
BU52_23050
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.822
BU52_27955
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.807
BU52_22225
Mixed polyketide synthase/non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.747
BU52_08235
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.726
BU52_33320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.723
BU52_05240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.722
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.