STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_23045Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (938 aa)    
Predicted Functional Partners:
BU52_07015
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.864
BU52_15165
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   0.802
BU52_16355
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.748
BU52_08200
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.731
BU52_29550
Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   0.728
BU52_05210
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
BU52_08130
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   0.659
BU52_17995
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
BU52_13750
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.628
BU52_14265
Integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.