STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_23805Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (528 aa)    
Predicted Functional Partners:
BU52_24365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.913
BU52_08125
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.846
BU52_32565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.846
BU52_23810
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.673
BU52_23795
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.614
BU52_23800
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
lspA
Hypothetical protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
    0.530
BU52_26480
Ionic transporter y4hA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.502
BU52_08390
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.460
BU52_23785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.