STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_24165Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)    
Predicted Functional Partners:
BU52_24160
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
BU52_18305
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
BU52_23150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BU52_29950
Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.511
BU52_30015
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
BU52_24350
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.491
BU52_15635
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.489
BU52_28690
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
BU52_00555
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
BU52_03185
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.474
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.