STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_24280Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
BU52_24285
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.964
BU52_09540
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.501
BU52_31745
Sterol-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
BU52_08525
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.457
BU52_11340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.457
BU52_19615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.457
BU52_14190
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
 
 
  0.440
BU52_10660
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
BU52_23775
Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
BU52_24295
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.