STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_24290Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
BU52_03335
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.674
BU52_24205
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.662
BU52_33340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.649
BU52_05870
Aromatic acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.645
BU52_01260
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.637
BU52_05850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family.
   
 
 0.632
BU52_04455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
BU52_04435
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
BU52_06480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
BU52_07695
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.