STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_24530Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (483 aa)    
Predicted Functional Partners:
katG
Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.773
BU52_11290
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.740
BU52_24285
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.706
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
   
 
  0.697
BU52_24535
Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.
    
 0.683
BU52_07665
Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.672
BU52_08280
Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.672
BU52_01830
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.633
BU52_09425
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.606
BU52_31045
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.606
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.