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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_24705Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)    
Predicted Functional Partners:
BU52_24710
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_24715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
BU52_24720
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
BU52_24695
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
BU52_24700
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
BU52_24690
Molybdopterin biosynthesis-like protein MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: Protein [...]
       0.714
BU52_24725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.696
BU52_24730
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.657
BU52_24735
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
BU52_01085
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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