Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BU52_25035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)    
Predicted Functional Partners:
BU52_24460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.901
BU52_24545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.836
BU52_19465
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
BU52_06835
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.815
BU52_05430
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.814
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
 0.814
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
 0.806
BU52_18535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.796
BU52_25040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
BU52_12905
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.775
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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