STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_25225Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (512 aa)    
Predicted Functional Partners:
BU52_25230
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.908
BU52_25235
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.903
BU52_06625
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.892
BU52_03600
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.891
BU52_25240
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.884
BU52_25220
Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_25245
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.883
BU52_25205
Pectin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.882
BU52_03605
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.864
BU52_01495
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.844
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.