STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_25785Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
BU52_25800
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.944
BU52_25790
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.889
BU52_25795
Aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.875
BU52_25805
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.755
crgA
Membrane protein; Involved in cell division; Belongs to the CrgA family.
 
     0.737
BU52_12055
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
BU52_07550
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
BU52_20990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
BU52_11880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.555
BU52_05460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.